Read more

Appendix 1

Sunday, Sept 18, 2016

HPP General Investigators Meeting in Taipei

(Last updated August 14, 2016)

Taipei International Convention Center

Plenary Session: Rm 101B

Break-out session: Rm 101B, 202A, South Lounge

Moderators: Young-Ki Paik & Fernando Corrales

Chair: Michael Snyder (SSAB Chair)
C-HPP: YK Paik, CM Overall, L. Lane. HPP C-HPP report summary in pdf format is available here.
B/D-HPP: JE van Eyk, FJ Corrales. This presentation is available in pdf format here.
Bioinformatics: Eric Deutsch (HPP MS data management guidelines). This presentation in pdf format is available here.
Antibodies: Emma Lundberg. This presentation in pdf format is available here.
MS: Susan Weintraub

Chair: Fernando Corrales
Genomics for HPP, Michael Snyder, Stanford Univ., CA, USA. This presentation in pdf format is available here.

Chair: Christopher M. Overall
Emerging Tech - Small ORF Analysis, Alan Saghatelian, Salk Inst. CA, USA

• Agenda 1: Brief Report on the Recapture of the HPP Cluster Concept (Young-Ki Paik) (Appendix 2)
• Agenda 2: The C-HPP Top 50 MP Marathon Challenge with Cluster Collaboration (Chris Overall) (Appendix 2)
• Agenda 3: Progress Reports on Missing Protein ID from PIs: 8 min each (Lydie Lane). This presentation in pdf format is available here.
  • Chr 3 Toshihide Nishimura, St. Marianna University School of Medicine, Kanagawa, Japan
  • Chr 10 Josh LaBaer, Arizona State University, USA
  • Chr 15 Gilberto Domont, Universidade Federal do Rio de Janeiro, Brazil
  • Chr 18 S.N. Naryzhny & A. Archakov, Institute of Biomedical Chemistry, Russia
  • Chr 19 György Marko-Varga, Lund University, Sweden
  • Chr 22 Akihlesh Pandey, Johns Hopkins University, USA
  • Chr X Tadashi Yamamoto, Niigata University, Japan
  • Chr Y Ghasem Hosseini Salekdeh, Royan Institute, Iran
• Discussion

10:20 Extreme conditions proteomics
Eugene Nikolaev, Inst Biomed Chem, Russia

10:35 Glycoproteomics
Hisashi Narimatsu, National Institute of Advanced Industrial Science and Technology, Japan

10:50 Brain Proteome Project
Peter Nilsson, SciLifeLab, KTH - Royal Institute of Technology, Stockholm, Sweden

11:05 Cardiovascular Initiative
Maggie Lam, University of California, Los Angeles, USA
PeiPei Ping, NHLBI Proteomics Center – UCLA, USA

11:20 Plasma Initiative
Jochen Schwenk, Science for Life Laboratory (KTH), Sweden

11:35 Food and Nutrition Initiative
Paola Roncada, Istituto Sperimentale Italiano Lazzaro Spallanzani, Italy

11:50 Diabetes Initiative
Loïc Dayon, Nestlé Institute of Health Sciences SA, Switzerland

12:05 Mitochondria Initiative
Mauro Fasano, University of Insubria, Italy

Participants: HPP Investigators involved in C-HPP, B/D-HPP, Pillars & CPTAC groups are welcome.
Moderator: Young-Ki Paik. Introduction slides from Young-Ki Paik is available here.

(1) Introduction (5-10 min)
-What is “Cluster Collaboration?” (Appendix 2)*
Move to each room for Break-out session

(2) Break-out Session (120 min) (see Table 1 below for composition)
A. Cancer Cluster Group (Rm 101B): Led by Siqi Liu, Ed Nice & Hui Zhang
▶ International Cancer Collaboration: Australia and US (15 min): Moonshot Project & Int’l Cancer Proteomics Collaboration, Mark Baker (HUPO President), Phil Robinson (ProCan) and Jerry Lee (NCI Office)
▶ Introduction of B/D-HPP Cancer (20 min): Hui Zhang (JHU), Chris Kinsinger (CPTAC), Jacob Kagan (EDRN), Shengtao Zhou (Sichuan Univ)
▶ Discussion on the Strategic Points (see below) (85 min)

B. IVTT Cluster Group (Rm 202A) (120 min) Led by Gyorgy Marko-Varga, Joshua LaBaer
▶ Discussion on the Strategic Points (Appendix 1)

C. Reproductive Disease (South Lounge) (120 min) Led by Charles Pineau & Ghasem Hosseini Salekdeh
▶ Discussion on the Strategic Points (see below)

Note: While both Membrane Proteins and Neurodegenerative Disease groups may join one of above groups, they may use 202A (Membrane Cluster) and 101B (Neurodegenerative D.) on Monday early morning (07:30-8:30) for their own Cluster meeting.{DIV}

Table 1. A Proposed List of Cluster Groups and Meeting Rooms (ver 2)*

Responsibility of Coordinators (Proposed)
1. To preside the joint cluster meeting on Sunday (13:10-15:20)

• Ask attendees to fill out the signup sheet provided in the room and hand in the list to HUPO Admin Office (Chelsea or Joanna).
• Lead discussion session by presenting first their own short talks (5-7) that are followed by the additional invited presenters whom the coordinators have previously arranged.
• Open discussion on the joint cluster efforts on
  1. The common scientific interests.
  2. Building a cooperative working cluster on the specific targets or technology or resource (e.g., discussion on the appointment of each group’s coordinators for next meeting, suggestions to HPP leadership, networking, more etc.).

2. To report the meeting results at the Cluster Report Session (led by Gil Omenn) during the Post-Congress Workshop in Sun Moon Lake, Thursday (10:50 to 12:30).

Floor Plan

Click here to go the overview of C-HPP activities in HUPO 2016, Taipei.