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Inaugural C-HPP Human Proteome Missing Proteins Workshop, 30th July, 2014

Inaugural C-HPP Human Proteome Missing Proteins Workshop

Interactive Zone, Ground Floor F10A, Australian School of Advanced Medicine:

Macquarie University, Sydney, NSW, Australia, 9:00am - 5:30pm, Weds 30th July, 2014

Acceptances: Gil Omenn, Young-Ki Paik, Mark Baker, Anthony Purcell, Peter Hoffmann, Shoba Ranganathan, Peter Karuso, Richard Christopherson, Susan Fanayan, Edouard Nice, Charlie Ahn, Ishmam Nawar, Mark Connors, Ann Goodchild, David Cantor, Mike Cahill, Dusan Milosevic, Benjamin Parker, Bhooma Venkatraman, Nurul Jufri, Sadia Mahboob, Harish Cheruku, Gargan Garg, Abidali Mohamedali, Vera Ignjatovic, Mark Raftery, Valerie Wasinger, Ling Zhong, Sydney Liu Lau, Gilles Guillemin, Jens Coorsen, Nicole Verrills, Leon McQuade, Maria Kavallaris, Marc Wilkins, MD Islam, Ben Heng, Valentina Valova, Ignatius Pang, Mark Molloy, Andrew Gilbert, Honghua Hu, Alamgir Khan, Sowmya Gopichandran, Jemma Wu, Judith Reinhard, Dana Pascovici, Karthik Kamath, Yoon Choi
Regrets: Bill Hancock, Bill Jordan, Simon Foote, Ian Smith, Ross Bathgate, David James, Charles Claudianos, Michael Crouch, Maria Kavallaris

Welcome (9:00-9:10)

C-HPP Session 1 (9:15 – 11:00; Chair Mark Baker; sponsored by the 13th International Conference on Bioinformatics & Korean C-HPP Initiative

20 min talks with 5 min discussion/questions

  • Gil Omenn (University of Michigan; Chair HPP) Strategies for Identifying HPP Missing Proteins. Presentation in pdf format is available here.
  • Young-Ki Paik (Yonsei University, Chair C-HPP) Combined Strategies for Functional Validation of Missing Proteins.
  • Mark Baker (Macquarie University) Taste and Smell - What Are You Missing?. Presentation in pdf format is available here.

AM Session (11:30 – 1:00; Chair Ed Nice, sponsored by Australian Peptide Association

15 min talks + combined session 10 min discussion/questions

  • Mark Connor (Macquarie University) Deorphanising GPCRs. Presentation in pdf format is available here.
  • Jens Coorssen (University of Western Sydney) Could 2DE help expose missing protein species?. Presentation in pdf format is available here.
  • Benjamin Parker (Garvan Institute) Discovery and targeted phosphoproteomics in under a week. Presentation in pdf format is available here.
  • Peter Hoffman (University of Adelaide) MALDI Imaging and proteomics on FFPE tissues. Presentation in pdf format is available here.

LUNCHTIME DEMO (1:30 – 2:00; Chair Marc Wilkins) Ignatius Pang, (UNSW) The PG Nexus Tools

PM Session 1 (2:00 – 3:30; Chair Nikki Verrills

15 min talks + combined session 10 min discussion/questions

  • Shoba Ranganathan (Macquarie University) Finding "missing" proteins. Presentation in pdf format is available here.
  • Ed Nice (Monash University) Good, Bad & Ugly Ab-based Missing Protein Strategies. Presentation in pdf format is available here.
  • David Cantor (Macquarie University) Deposit raw MS data to PRIDE/ProteomeXchange. Presentation in pdf format is available here.
  • Nikki Verrills (University of Newcastle) Identification of oncogenic signalling pathways in myeloid leukaemia using phosphoproteomics.

PM Session 2 (4:00 - 5:30; Chair Tony Purcell, sponsored by HUPO2010 Association

15 min talks + combined session 10 min discussion/questions

  • Vera Ignjatovic (University of Melbourne) The Human Proteome PediOme Project. Presentation in pdf format is available here.
  • Peter Karuso (Macquarie University) Small Molecule Approaches for Protein Discovery. Presentation in pdf format is available here.
  • Tony Purcell (Monash University) Immunoproteomics. Presentation in pdf format is available here.

Dinner (25 acceptances, 6:00 – 8:30)

Mediterranean Pizza, 1 Trafalgar Pl, Marsfield (sponsored by Sigma Aldrich Australia, Terra Preta Truffles, De Iulius Wines, Diasorin & Bioplatforms Australia).

Photos from the workshop is available by clicking on the photo above.