| SUN, Sept 27%%%HPP General Investigators Meeting 08:30-15:00 Rm: 11 |
MON, Sept 28%%%C-HPP (Part 1) Poster Session 7:30 - 09:00 & 16:20-17:30 Exhibit Hall |
TUES, Sept 29%%%C-HPP (Part 3) Principal Investigator Council Meeting 13:15 - 14:15%%%Room 12 |
Oct 1, Thursday HPP Post-Congress Day Venue: SFU Harbour Centre 08:30 - 16:30 |
|---|---|---|---|
(Chaired by Gil Omenn) 8:30: Gathering/coffee Progress of HPP 09:00: Overview and Metrics 09:20: C-HPP highlights 09:40: B/D-HPP highlights 10:00: PeptideAtlas/neXtProt 2015 updates 10:20: Human Protein Atlas 2015%%%10:40: JPR C-HPP 2015 SI and Highlights 11:30: Lunch break-out Sessions C-HPP (Rm 18) B/D-HPP (Rm 19) 13:30: Crowd-Sourcing Prot. 14:00: Testis Proteins 15:00: Membrane Proteins 16:00: Reports from Breakout Session 16:30: Plan of HPP activities 17:00: Adjourn Details in Appendix 1 |
(Chaired by Lydie Lane and Peter Horvatovich) ● Session 1: 07:30-09:00 (Chr Odd No. 1, 3, 5….21) Session 2: 16:20-17:30 (Chr Even No. 2, 4,.22.+X, Y, Mito.) ● Poster Awards (Cash Prize and Award Certificate by HUPO President) will be given to Total 10 Best Outstanding Poster Presenters at the Closing Ceremony. Details in Appendix 2 MON, Sept 28%%%C-HPP (Part 2) Bioinformatics Session 13:15 - 14:15%%%Room: 12 (Chair Eric Deutsch) ● Topics: “What is sufficient evidence for publishing claims of detection of missing proteins?” ● Speakers: Eric Deutsch, Reudi Aebersold and more (details will be updated later). |
(Chair: Young-Ki Paik) ● Lunch will be provided to all PIC members and invited members: C-HPP EC, SSAB, Co-PIs) ● Agenda (in part) - Nomination/Elections of co-Chair, American Rep - Restructuring the C-HPP groups - Publication Issues of C-HPP Achievements - 2016 Plans and more WED, Sept 30%%%HPP Keynote Session 14:30 - 16:20 Room 11 (Co-chairs: Gil Omenn and William S. Hancock) Two keynote talks and multiple invited oral presentations. |
08:30-16:30 ● Highlights of Sun-Wed HPP ● Strategies for identifying “missing proteins”/ Novel Proteins etc. ● SRM/SWATH-MS: -HPP Deliverables 2016%%%● C-HPP, Cross-Chr PL ● B/D-HPP, Popular/ priority proteins etc ● Antibody Pillar, K.D. Validation Initiative; etc. ● Proposed Crowd-Sourcing Project ● Summary and Discussion of Goals and Deliverables for 2016-2017(All, including SSAB members). 16:30 Adjourn/Reception. |
Appendix 1
Sunday, Sept 27, HPP General Investigators’ Meeting, Room: 11
9:00 Gil Omenn: Overview and Metrics. This presentation in pdf format is available here.
9:20 Young-Ki Paik: C-HPP highlights. This presentation in pdf format is available here.
9:40 Jennifer van Eyk: B/D-HPP highlights
10:00 Eric Deutsch & Lydie Lane: PeptideAtlas and neXtProt 2015 updates. The presenation of Lydie Lane is available here, while the presentation of Eric Deutsch is available here. Both presentations are in pdf format.
10:20 Mathias Uhlen & Emma Lundberg: Human Protein Atlas 2015. The presentation in pdf format is available here.
Bill Hancock, Chris Overall, Eric Deutsch, Young-Ki Paik, Gil Omenn.
- Ulrich Eckhard (Univ. of British Columbia, Vancouver, Canada): Recent Progress on TAILS N-terminomics. This presentation is available in pdf format here.
- Pengyuan Yang (Fudan Univ., Shanghai, China): Finding missing proteins from epigenetically manipulated human cell lines.
- Ping Xu (BPRC, Beijing, China): Special enrichment strategies for missing proteins.
- Peter Horvatovich (Univ. of Groningen, Groningen, The Netherlands): In vitro transcription/translation system: a versatile tool. This presentation is available here.
Breakout session 1: C-HPP working session with lunch, led by Young-Ki Paik (Rm 18). See Appendix 1A.
Breakout session 2: B/D-HPP working session with lunch, led by Jennifer van Eyk & Fernando Corrales (Rm 19)
Members of the resource pillars will go to these breakouts.
Proposed Crowd-Sourcing Project on Plasma Proteome Variation, a multiplex SRM/SWATH-MS analysis of priority proteins in HUPO Volunteers (Micheal Snyder)
Initial comments from Senior Scientific Advisory Board (Snyder et al). Presentation of Micheal Snyder is avilable here in pdf format.
Charles Pineau (France, presentation is available here), Siqi Liu (China, presentation in pdf format is available here), Ghasem Salekdeh (Iran), Cecilia Lindskog (Sweden)
YuJu Chen (Taiwan), Takeshi Tomonaga (Japan), Akhilesh Pandey (USA), Mathias Uhlen, (Sweden); Lead Discussant: Alexey Nesvizhskii
20 morning B/D-HPP and C- HPP workshops (M-T-W); Mon lunchtime C-HPP Bioinformatics workshop, Tues Early Career Researchers session, Tues lunchtime C-HPP PI mtg, Tues HPP Congress scientific session, post- Congress HPP Next Steps Thursday Workshop.
Appendix 1A
Agenda for the C-HPP Break-out Session
Part I: Opening Stimulatory Talk: New ideas for missing protein study?
11:30 Use of mouse peptides/tissues for validation of human missing proteins
Christoph H. Borchers, University of Victoria - Genome British Columbia Proteomics Centre
11:45 Q & A
Part II: Update on the C-HPP Restructuring Initiative
11:50 Introduction & Guidance for Group Discussion
| Group | Chromosome Team | Remarks |
|---|---|---|
| IVTT | 5, 10, 15, 16, 19 | |
| Cancer | 1, 8, 20, 9, 11, 13 (12, 17 can be joined) (Liver, Lung and CRC) | China-Korea Alliance |
| Reproduction Disease | 2, 14, X, Y | |
| Membrane Proteins | 4, 7, 18 (more) |
11:50 Introduction & Guidance for Group Discussion
12:00 Group Discussion with Lunch
Common agenda to be discussed at each group
Examples: (The followings are just minimum number of items to be discussed)
- Organization, Designate discussion leader (spokesperson) within each group
- Goal Setting (year 2016; 2017): -Qualitative and quantitative ways
- Strategy for coordinated research within group
- Sharing reagents (clones, ab, assay) and resources (blood, tissues, cell lines)
Click here to go the overview of C-HPP activities in HUPO 2015, Vancouver.